Schedule

IWSG-Life

Wednesday, 23 May

Joint Session with HealthGrid
16:00 - 17:30 joint with e-infrastructure colloquium

13:30 - 14.00: Registration

14:00 - 15:30 Chair Sandra Gesing
16:00 - 17:30 Chair Tristan Glatard

 Time Room G0-209 (Vrijzaal, building G, ground floor)
 14:00 - 14:30
 Shayan Shahand, Matthan Caan, Antoine Van Kampen and Silvia Olabarriaga                                                       Slides
 Integrated Support for Neuroscience Research: from Study Design to Publication
 14:30 - 15:00
 Vincent Rouilly, Eva Pujadas, Béla Hullár, Csaba Balázs, Peter Kunszt and Michael Podvinec                                Slides
 iBRAIN2: Automated analysis and data handling for RNAi screens
 15:00 - 15:15
 Irene Nooren, Timo Breit, Jan Bot, Machiel Jansen, Joost Kok and Han Rauwerda                                       Slides
 
e-BioGrid: Building a Dutch e-science infrastructure for life science research
 15:15 - 15:30
 Vitaliy Vishnevsky and Mariya Volzheva                                                                                                                     Slides
 Medical Grid for population researches in cardiology based on electrocardiograms
 15:30 - 16:00
 Coffee break
 16:00 - 16:45
 Keynote by Roberto Barbera                                                                                                                                       Slides   
 16:45 - 17:30
 Panel Discussion "Data modelling and analysis for the masses with cloud-enabled science gateways?"
 Panelists: Roberto Barbera, Shantenu Jha, Peter Kacsuk, Tony Solomonides, Henri Vrooman and Nancy Wilkins-Diehr

17.30: Welcome/closing reception


Thursday, 24 May


09:00 - 12:30 Chair Jens Krüger
14:00 - 18:00 Chair Gergely Sipos


 Time  Room G0-209 (Vrijzaal, building G, ground floor)
 09:00 - 10:00
 Keynote by Peter Kacsuk                                                                                                                                              Slides
 10:00 - 10:30
 Konstantinos Karasavvas, Katy Wolstencroft, Eleni Mina, Don Cruickshank, Alan Williams, David De Roure,
 Carole Goble and Marco Roos                                                                                                            Slides
 Opening new gateways to workflows for life scientists
 10:30 - 11:00
 Coffee break
 11:00 - 11:30
 Sonja Herres-Pawlis, Georg Birkenheuer, André Brinkmann, Sandra Gesing, Richard Grunzke, René Jäkel, Oliver
 Kohlbacher, Jens Krüger and Ines dos Santos Vieira                                                                               Slides
 Workflow-enhanced conformational analysis of guanidine zinc complexes via a science gateway
 11:30 - 12:00
 Olaf Schneider, Rasmus Fogh, Ulrich Sternberg, Konstantin Klenin and Ivan Kondov                                      Slides
 Structure simulation with calculated NMR parameters - integrating COSMOS into the CCPN framework
 12:00 - 12:15
 Peter Borsody, Tamas Kiss, Gabor Terstyanszky, Stephen Winter, Pamela Greenwell and Hans Heindl               Slides
 Enhancing a Science Gateway with Windows Azure based Resources for Virtual Screening
 12:15 - 12:30
 Valeria Ardizzone and Fulvio Galeazzi
 
Diagnostic Enhancement of Confidence by an International Distributed Environment project (DECIDE)
 12:30 - 14:00
 Lunch
 14:00 - 15:00
 Keynote by Nancy Wilkins-Diehr                                                                                                         Slides
 15:00 - 15:30
 Coffee break
 15:30 - 18:00
 Structured Discussion facilitated by EGI.eu                                                                                          Slides
 Defining a European roadmap for science gateways for Life Sciences

20:00 IWSG-Life Dinner at Café de Jaren


Friday, 25 May

09:00 - 10:30 Chair Peter Kunszt
11:00 - 12:45 Chair Sandra Gesing

 Time  Room L0-223.1 (building L, ground floor)
 09:00 - 09:30
 Valeria Ardizzone, Riccardo Bruno, Antonio Calanducci, Carla Carrubba, Marco Fargetta, Elisa Ingrà, Giuseppina
 Inserra, Giuseppe La Rocca, Salvatore Monforte, Fabrizio Pistagna, Rita Ricceri, Riccardo Rotondo, Diego Scardaci
 and Roberto Barbera                                                                                                                         Slides
 Science Gateways for Semantic-Web-Based Life Science Applications
 
 09:30 - 10:00
 Aaron Golden, Andrew S. McLellan, Robert A. Dubin, Qiang Jing, Pilib ó Broin, David Moskowitz, Zhengdong Zhang,
 Masako Suzuki, Joseph Hargitai, R. Brent Calder and John M. Greally
                                                          Slides
 The Einstein Science Gateway using WASP - A High Throughput Multi-Layered Life Sciences Portal for XSEDE
 10:00 - 10:15
 Marcelina Borcz, Rafal Kluszczynski, Katarzyna Skonieczna, Tomasz Grzybowski and Piotr Bala                        Slides
 Processing the biomedical data on the grid using the UNICORE workflow system
 10:15 - 10:30
 Heorhiy Byelas and Morris Swertz                                                                                                        Slides
 
Using grid middleware as a computational resource for large-scale NGS and imputation in the eBioGrid project
 10:30 - 11:00
 Coffee Break
 11:00 - 11:30
 Gabor Terstyanszky, Tamas Kiss, Stephen Winter, Tamas Kukla, Pamela Greenwell, Hans Heindl and Sharron
 McEldowney                                                                                                                                    Slides

 Application Repository and Science Gateway for Running Molecular Docking and Dynamics Simulations
 11:30 - 12:00
 René Siewert, Svenja Specovius, Jie Wu and Dagmar Krefting                                                                   Slides
 Web-based Interactive Visualization in a Grid-enabled Neuroimaging Application Using HTML5
 12:00 - 12:15
 Miklos Kozlovszky, Gergely Windisch and Ákos Balaskó                                                                             Slides
 Bioinformatics eScience gateway services using the HP-SEE infrastructure
 12:15 - 12:30
 Lorenz Blum, Béla Hullár, Andreas Quandt and Peter Kunszt                                                                      Slides
 
Proteomics Portal Demo
 12:30 - 12:45
 Summary and Close by Sandra Gesing




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